• 홈
• CanvasPartition
• Segmentation

C# 클래스 CanvasPartition.Segmentation

파일 보기 프로젝트 열기: Illumina/canvas 1 사용 예제들

공개 프로퍼티들

프로퍼티	타입	설명
Alpha	double
DefaultAlpha	double
UndoMethod	SegmentSplitUndo

공개 메소드들

메소드	설명
SegmentGenome ( string outPath, SegmentationMethod method, bool isGermline ) : void
Segmentation ( string inputBinPath, string forbiddenBedPath, string dataType = "logratio", int maxInterBinDistInSegment = 1000000 ) : System

비공개 메소드들

메소드	설명
CBS ( uint nPerm = 10000, string pMethod = "hybrid", int minWidth = 2, int kMax = 25, uint nMin = 200, double eta = 0.05, uint sbdry = null, double trim = 0.025, double undoPrune = 0.05, double undoSD = 3, int verbose = 1 ) : void	CBS: circular binary segmentation porting the R function segment in DNAcopy
GetDummySegmentationResults ( ) : GenomeSegmentationResults
ReadBEDInput ( ) : void	Assume that the rows are sorted by the start position and ascending order
Wavelets ( bool isGermline, double thresholdLower = 5, double thresholdUpper = 80, int minSize = 10, int verbose = 1 ) : void	Wavelets: unbalanced HAAR wavelets segmentation
WriteCanvasPartitionResults ( string outPath ) : void

메소드 상세

프로퍼티 상세