C# 클래스 CanvasCommon.CopyNumberOracle

This class represents a set of known copy number calls ("truth set"), useful for training models.

공개 프로퍼티들

프로퍼티	타입	설명
KnownCN	List>.Dictionary

공개 메소드들

메소드	설명
GetKnownCNForSegment ( CanvasSegment segment ) : int
GetKnownClonalityForSegment ( CanvasSegment segment ) : double
LoadKnownCN ( string oraclePath ) : void

보호된 메소드들

메소드	설명
LoadKnownCNBed ( string oracleBedPath ) : void	Load known CN data from a .bed file. File lines have fields: chromosome, start, end, chromcountA, chromcountB So, copy number is the sum of the last 2 fields, major chromosome count is the max of the last 2 fields.
LoadKnownCNVCF ( string oracleVCFPath ) : void

메소드 상세

GetKnownCNForSegment() 공개 메소드

public GetKnownCNForSegment ( CanvasSegment segment ) : int
segment	CanvasSegment
리턴	int

GetKnownClonalityForSegment() 공개 메소드

public GetKnownClonalityForSegment ( CanvasSegment segment ) : double
segment	CanvasSegment
리턴	double

LoadKnownCN() 공개 메소드

public LoadKnownCN ( string oraclePath ) : void
oraclePath	string
리턴	void

LoadKnownCNBed() 보호된 메소드

Load known CN data from a .bed file. File lines have fields: chromosome, start, end, chromcountA, chromcountB So, copy number is the sum of the last 2 fields, major chromosome count is the max of the last 2 fields.

protected LoadKnownCNBed ( string oracleBedPath ) : void
oracleBedPath	string
리턴	void

LoadKnownCNVCF() 보호된 메소드

protected LoadKnownCNVCF ( string oracleVCFPath ) : void
oracleVCFPath	string
리턴	void

프로퍼티 상세

KnownCN 공개적으로 프로퍼티

public Dictionary> KnownCN
리턴	List>.Dictionary