Property | Type | Description | |
---|---|---|---|
SA_invsamples | ListIFS | ||
SA_marked | |||
SA_sample_step | short | ||
SA_samples | ListIFS | ||
SeqPsi | Sequence | ||
charT | int[] | ||
newF | Bitmap |
Property | Type | Description | |
---|---|---|---|
GetCharId | int | ||
_get_suffix_lazy | IList |
||
_lex_cmp | int |
Method | Description | |
---|---|---|
Build ( string sa_name, SequenceBuilder seq_builder = null, BitmapFromBitStream bitmap_builder = null ) : void | ||
CountOcc ( IList |
||
Extract ( int start_pos, int len ) : IList |
||
GetPsi ( int pos ) : int | ||
GetSuffix ( IList |
||
GetSuffixLazy ( int suffix_index, int len ) : IEnumerable |
||
GetText ( IList |
||
Load ( string basename ) : void | ||
Locate ( IList |
||
Locate ( int suffix ) : int | ||
Save ( string basename ) : void | ||
Search ( IList |
||
SeqCSA ( ) : System |
Method | Description | |
---|---|---|
GetCharId ( int c ) : int | ||
_get_suffix_lazy ( int suffix ) : IList |
||
_lex_cmp ( IList |
public Build ( string sa_name, SequenceBuilder seq_builder = null, BitmapFromBitStream bitmap_builder = null ) : void | ||
sa_name | string | |
seq_builder | SequenceBuilder | |
bitmap_builder | BitmapFromBitStream | |
return | void |
public Extract ( int start_pos, int len ) : IList |
||
start_pos | int | |
len | int | |
return | IList |
public GetSuffix ( IList |
||
Output | IList |
|
suffix_index | int | |
len | int | |
return | IList |
public GetSuffixLazy ( int suffix_index, int len ) : IEnumerable |
||
suffix_index | int | |
len | int | |
return | IEnumerable |
public Search ( IList |
||
query | IList |
|
start_pos | int | |
end_pos | int | |
return | bool |