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C# Class libsbmlcs.Model

Afficher le fichier Open project: sys-bio/libroadrunner-deps Class Usage Examples

Méthodes publiques

Méthode	Description
Dispose ( ) : void
Model ( Model orig ) : System
Model ( SBMLNamespaces sbmlns ) : System
Model ( long level, long version ) : System
addCompartment ( Compartment c ) : int
addCompartmentType ( CompartmentType ct ) : int
addConstantAttribute ( ) : void
addConstraint ( Constraint c ) : int
addDefinitionsForDefaultUnits ( ) : void
addEvent ( Event e ) : int
addFunctionDefinition ( FunctionDefinition fd ) : int
addInitialAssignment ( InitialAssignment ia ) : int
addModifiers ( ) : void
addParameter ( Parameter p ) : int
addReaction ( Reaction r ) : int
addRule ( Rule r ) : int
addSpecies ( Species s ) : int
addSpeciesType ( SpeciesType st ) : int
addUnitDefinition ( UnitDefinition ud ) : int
appendAnnotation ( XMLNode annotation ) : int
appendAnnotation ( string annotation ) : int
appendFrom ( Model model ) : int
assignRequiredValues ( ) : void
clone ( ) : Model
connectToChild ( ) : void
convertL1ToL2 ( ) : void
convertL1ToL3 ( ) : void
convertL1ToL3 ( bool addDefaultUnits ) : void
convertL2ToL1 ( ) : void
convertL2ToL1 ( bool strict ) : void
convertL2ToL3 ( ) : void
convertL2ToL3 ( bool strict ) : void
convertL2ToL3 ( bool strict, bool addDefaultUnits ) : void
convertL3ToL1 ( ) : void
convertL3ToL1 ( bool strict ) : void
convertL3ToL2 ( ) : void
convertL3ToL2 ( bool strict ) : void
convertParametersToLocals ( long level, long version ) : void
convertStoichiometryMath ( ) : void
createAlgebraicRule ( ) : AlgebraicRule
createAssignmentRule ( ) : AssignmentRule
createCompartment ( ) : Compartment
createCompartmentType ( ) : CompartmentType
createConstraint ( ) : Constraint
createDelay ( ) : Delay
createEvent ( ) : Event
createEventAssignment ( ) : EventAssignment
createFunctionDefinition ( ) : FunctionDefinition
createInitialAssignment ( ) : InitialAssignment
createKineticLaw ( ) : KineticLaw
createKineticLawLocalParameter ( ) : LocalParameter
createKineticLawParameter ( ) : Parameter
createModifier ( ) : ModifierSpeciesReference
createParameter ( ) : Parameter
createProduct ( ) : SpeciesReference
createRateRule ( ) : RateRule
createReactant ( ) : SpeciesReference
createReaction ( ) : Reaction
createSpecies ( ) : Species
createSpeciesType ( ) : SpeciesType
createTrigger ( ) : Trigger
createUnit ( ) : Unit
createUnitDefinition ( ) : UnitDefinition
dealWithDefaultValues ( ) : void
dealWithEvents ( bool strict ) : void
dealWithModelUnits ( ) : void
dealWithModelUnits ( bool strict ) : void
dealWithStoichiometry ( ) : void
enablePackageInternal ( string pkgURI, string pkgPrefix, bool flag ) : void
getAreaUnits ( ) : string
getAssignmentRule ( string variable ) : AssignmentRule
getAssignmentRuleByVariable ( string variable ) : AssignmentRule
getCompartment ( long n ) : Compartment
getCompartment ( string sid ) : Compartment
getCompartmentType ( long n ) : CompartmentType
getCompartmentType ( string sid ) : CompartmentType
getConstraint ( long n ) : Constraint
getConversionFactor ( ) : string
getElementByMetaId ( string metaid ) : SBase
getElementBySId ( string id ) : SBase
getElementName ( ) : string
getEvent ( long n ) : Event
getEvent ( string sid ) : Event
getExtentUnits ( ) : string
getFormulaUnitsDataForAssignment ( string sid ) : SWIGTYPE_p_FormulaUnitsData
getFormulaUnitsDataForVariable ( string sid ) : SWIGTYPE_p_FormulaUnitsData
getFunctionDefinition ( long n ) : FunctionDefinition
getFunctionDefinition ( string sid ) : FunctionDefinition
getId ( ) : string
getInitialAssignment ( long n ) : InitialAssignment
getInitialAssignment ( string symbol ) : InitialAssignment
getInitialAssignmentBySymbol ( string symbol ) : InitialAssignment
getLengthUnits ( ) : string
getListOfCompartmentTypes ( ) : ListOfCompartmentTypes
getListOfCompartments ( ) : ListOfCompartments
getListOfConstraints ( ) : ListOfConstraints
getListOfEvents ( ) : ListOfEvents
getListOfFunctionDefinitions ( ) : ListOfFunctionDefinitions
getListOfInitialAssignments ( ) : ListOfInitialAssignments
getListOfParameters ( ) : ListOfParameters
getListOfReactions ( ) : ListOfReactions
getListOfRules ( ) : ListOfRules
getListOfSpecies ( ) : ListOfSpecies
getListOfSpeciesTypes ( ) : ListOfSpeciesTypes
getListOfUnitDefinitions ( ) : ListOfUnitDefinitions
getModifierSpeciesReference ( string sid ) : ModifierSpeciesReference
getName ( ) : string
getNumCompartmentTypes ( ) : long
getNumCompartments ( ) : long
getNumConstraints ( ) : long
getNumEvents ( ) : long
getNumFunctionDefinitions ( ) : long
getNumInitialAssignments ( ) : long
getNumParameters ( ) : long
getNumReactions ( ) : long
getNumRules ( ) : long
getNumSpecies ( ) : long
getNumSpeciesTypes ( ) : long
getNumSpeciesWithBoundaryCondition ( ) : long
getNumUnitDefinitions ( ) : long
getParameter ( long n ) : Parameter
getParameter ( string sid ) : Parameter
getRateRule ( string variable ) : RateRule
getRateRuleByVariable ( string variable ) : RateRule
getReaction ( long n ) : Reaction
getReaction ( string sid ) : Reaction
getRule ( long n ) : Rule
getRule ( string variable ) : Rule
getRuleByVariable ( string variable ) : Rule
getSpecies ( long n ) : Species
getSpecies ( string sid ) : Species
getSpeciesReference ( string sid ) : SpeciesReference
getSpeciesType ( long n ) : SpeciesType
getSpeciesType ( string sid ) : SpeciesType
getSubstanceUnits ( ) : string
getTimeUnits ( ) : string
getTypeCode ( ) : int
getUnitDefinition ( long n ) : UnitDefinition
getUnitDefinition ( string sid ) : UnitDefinition
getVolumeUnits ( ) : string
hasRequiredElements ( ) : bool
isPopulatedListFormulaUnitsData ( ) : bool
isSetAreaUnits ( ) : bool
isSetConversionFactor ( ) : bool
isSetExtentUnits ( ) : bool
isSetId ( ) : bool
isSetLengthUnits ( ) : bool
isSetName ( ) : bool
isSetSubstanceUnits ( ) : bool
isSetTimeUnits ( ) : bool
isSetVolumeUnits ( ) : bool
populateListFormulaUnitsData ( ) : void
removeCompartment ( long n ) : Compartment
removeCompartment ( string sid ) : Compartment
removeCompartmentType ( long n ) : CompartmentType
removeCompartmentType ( string sid ) : CompartmentType
removeCompartmentTypes ( ) : void
removeConstraint ( long n ) : Constraint
removeEvent ( long n ) : Event
removeEvent ( string sid ) : Event
removeFromParentAndDelete ( ) : int
removeFunctionDefinition ( long n ) : FunctionDefinition
removeFunctionDefinition ( string sid ) : FunctionDefinition
removeInitialAssignment ( long n ) : InitialAssignment
removeInitialAssignment ( string symbol ) : InitialAssignment
removeParameter ( long n ) : Parameter
removeParameter ( string sid ) : Parameter
removeParameterRuleUnits ( bool strict ) : void
removeReaction ( long n ) : Reaction
removeReaction ( string sid ) : Reaction
removeRule ( long n ) : Rule
removeRule ( string variable ) : Rule
removeRuleByVariable ( string variable ) : Rule
removeSpecies ( long n ) : Species
removeSpecies ( string sid ) : Species
removeSpeciesType ( long n ) : SpeciesType
removeSpeciesType ( string sid ) : SpeciesType
removeSpeciesTypes ( ) : void
removeUnitDefinition ( long n ) : UnitDefinition
removeUnitDefinition ( string sid ) : UnitDefinition
renameAllIds ( IdentifierTransformer idTransformer ) : int
renameAllIds ( IdentifierTransformer idTransformer, ElementFilter filter ) : int
renameIDs ( SBaseList elements, IdentifierTransformer idTransformer ) : void
renameSIdRefs ( string oldid, string newid ) : void
renameUnitSIdRefs ( string oldid, string newid ) : void
setAnnotation ( XMLNode annotation ) : int
setAnnotation ( string annotation ) : int
setAreaUnits ( string units ) : int
setConversionFactor ( string units ) : int
setExtentUnits ( string units ) : int
setId ( string sid ) : int
setLengthUnits ( string units ) : int
setName ( string name ) : int
setSpatialDimensions ( ) : void
setSpatialDimensions ( double dims ) : void
setSpeciesReferenceConstantValueAndStoichiometry ( ) : void
setSubstanceUnits ( string units ) : int
setTimeUnits ( string units ) : int
setVolumeUnits ( string units ) : int
unsetAreaUnits ( ) : int
unsetConversionFactor ( ) : int
unsetExtentUnits ( ) : int
unsetId ( ) : int
unsetLengthUnits ( ) : int
unsetName ( ) : int
unsetSubstanceUnits ( ) : int
unsetTimeUnits ( ) : int
unsetVolumeUnits ( ) : int

Private Methods

Méthode	Description
Model ( IntPtr cPtr, bool cMemoryOwn ) : System
getCPtr ( Model obj ) : HandleRef
getCPtrAndDisown ( Model obj ) : HandleRef

Method Details