C# Класс PrimerDesigner.RealPrimerBlastRun

Открытые методы

Метод	Описание
BlastArgs ( String genomes ) : String[]	Specifies arguments for BLAST results for all five TB genomes. Format ex: blast_results_CDC1551.xml
MakeBlastDB ( String genomes ) : String[]	Specifies argements for the makeblastbd command.
RealPrimerBlastRun ( String primerSequence, String genomes ) : System
Run ( ) : void	Starts a new Command process.
WriteSequenceFasta ( String sequence, String filename, String description ) : void
WriteSequenceText ( String sequence ) : void	Writes the inputted sequence to a text file. We will write to the GnomesFolder in the bin folder of the executable. Used for Primer Sequence

Specifies arguments for BLAST results for all five TB genomes. Format ex: blast_results_CDC1551.xml

public BlastArgs ( String genomes ) : String[]
genomes	String	String array of genomes being made into databases
Результат	String[]

Specifies argements for the makeblastbd command.

public MakeBlastDB ( String genomes ) : String[]
genomes	String	String array of genomes being made into databases
Результат	String[]

public RealPrimerBlastRun ( String primerSequence, String genomes ) : System
primerSequence	String
genomes	String
Результат	System

Starts a new Command process.

public Run ( ) : void
Результат	void

public WriteSequenceFasta ( String sequence, String filename, String description ) : void
sequence	String
filename	String
description	String
Результат	void

Writes the inputted sequence to a text file. We will write to the GnomesFolder in the bin folder of the executable. Used for Primer Sequence

public WriteSequenceText ( String sequence ) : void
sequence	String	String of the DNA sequence being written to file
Результат	void