Свойство | Type | Description | |
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commentPrefix | HashSet |
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commentPrefixExceptions | HashSet |
Méthode | Description | |
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AddFilter ( List |
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GetAvailableAnnots ( string &baseNames, AnnotType &types, string &files ) : string[][] | ||
GetAvailableAnnots ( string &baseNames, AnnotType &types, string &files, List |
Read-in all available annotations.
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GetAvailableAnnots ( string &baseNames, string &files ) : string[][] | ||
GetAvailableAnnots ( string &baseNames, string &files, List |
Read-in all available annotations.
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GetNumFilterParams ( string selection ) : BaseLibS.Param.Parameter[] | ||
GetRelationsNumFilter ( Parameters param, string &errString, int &colInds, bool &and ) : Relation[] | ||
GetRowCount ( |
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HasAnyDescription ( IMatrixData data ) : bool | ||
IsValidRowNumFilter ( double row, Relation relations, bool and ) : bool | ||
LoadMatrixData ( string[]>.IDictionary |
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ReadMatrixFromFile ( IMatrixData mdata, |
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ReadMatrixFromFile ( IMatrixData mdata, |
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WriteMatrixToFile ( IMatrixData data, string filename, bool addtlMatrices = false ) : void |
Write matrix to file with tab separation
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Méthode | Description | |
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ColumnIndices ( string typeRow, int &eInds, int &nInds, int &cInds, int &tInds, int &mInds ) : void | ||
FromString1 ( string s ) : AnnotType | ||
GetAnnotFiles ( ) : string[] | ||
GetAvailableAnnots ( string file, string &baseName, AnnotType &types ) : string[] | ||
GetColIndsNumFilter ( Parameters parameters, string &realVariableNames ) : int[] | ||
GetColumnSelectionParameter ( string selection ) : BaseLibS.Param.Parameter | ||
GetHasAddtlMatrices ( |
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GetRelations ( Parameters parameters, string realVariableNames ) : Relation[] | ||
GetRelationsParameter ( ) : BaseLibS.Param.Parameter | ||
GetVariableName ( int i ) : string | ||
IsValidLine ( string line, char separator, List |
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IsValidLine ( string line, char separator, List |
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LoadMatrixData ( IList |
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ParseExp ( string s, float &expressionValue, bool &isImputedValue, float &qualityValue ) : void | ||
RemoveQuotes ( IEnumerable |
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RemoveQuotes ( string name ) : string | ||
RemoveSplitWhitespace ( string s ) : string | ||
SplitAnnotRows ( string[]>.IDictionary |
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SplitLine ( string line, char separator ) : string[] | ||
ToDoubles ( string s1, bool hasAddtlMatrices ) : double[] |
public static AddFilter ( List |
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filters | List |
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p | Parameters | |
inds | int | |
errString | string | |
Résultat | void |
public static GetAvailableAnnots ( string &baseNames, AnnotType &types, string &files ) : string[][] | ||
baseNames | string | |
types | AnnotType | |
files | string | |
Résultat | string[][] |
public static GetAvailableAnnots ( string &baseNames, AnnotType &types, string &files, List |
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baseNames | string | |
types | AnnotType | |
files | string | |
badFiles | List |
all files which couldn't be read |
Résultat | string[][] |
public static GetAvailableAnnots ( string &baseNames, string &files ) : string[][] | ||
baseNames | string | |
files | string | |
Résultat | string[][] |
public static GetAvailableAnnots ( string &baseNames, string &files, List |
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baseNames | string | |
files | string | |
badFiles | List |
all files which couldn't be read |
Résultat | string[][] |
public static GetNumFilterParams ( string selection ) : BaseLibS.Param.Parameter[] | ||
selection | string | |
Résultat | BaseLibS.Param.Parameter[] |
public static GetRelationsNumFilter ( Parameters param, string &errString, int &colInds, bool &and ) : Relation[] | ||
param | Parameters | |
errString | string | |
colInds | int | |
and | bool | |
Résultat | Relation[] |
public static GetRowCount ( |
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reader | ||
auxReader | ||
mainColIndices | int | |
filters | List |
|
separator | char | |
Résultat | int |
public static HasAnyDescription ( IMatrixData data ) : bool | ||
data | IMatrixData | |
Résultat | bool |
public static IsValidRowNumFilter ( double row, Relation relations, bool and ) : bool | ||
row | double | |
relations | Relation | |
and | bool | |
Résultat | bool |
public static LoadMatrixData ( string[]>.IDictionary |
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annotationRows | string[]>.IDictionary | |
eInds | int | |
cInds | int | |
nInds | int | |
tInds | int | |
mInds | int | |
processInfo | ||
colNames | IList |
|
mdata | IMatrixData | |
reader | ||
auxReader | ||
nrows | int | |
origin | string | |
separator | char | |
shortenExpressionNames | bool | |
filters | List |
|
Résultat | void |
public static ReadMatrixFromFile ( IMatrixData mdata, |
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mdata | IMatrixData | |
processInfo | ||
filename | string | |
separator | char | |
Résultat | void |
public static ReadMatrixFromFile ( IMatrixData mdata, |
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mdata | IMatrixData | |
processInfo | ||
filename | string | |
eInds | int | |
nInds | int | |
cInds | int | |
tInds | int | |
mInds | int | |
mainFilterParameters | Parameters | |
numericalFilterParameters | Parameters | |
shortenExpressionColumnNames | bool | |
Résultat | void |
public static WriteMatrixToFile ( IMatrixData data, string filename, bool addtlMatrices = false ) : void | ||
data | IMatrixData | |
filename | string | |
addtlMatrices | bool | if true numbers are converted to triples value;imputed;quality |
Résultat | void |