C# Class LibiadaCore.Core.BaseChain

Basic sequence class. Stores alphabet and building.

Inheritance: AbstractChain

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Public Properties

Property	Type	Description
Id	long

Protected Properties

Property	Type	Description
alphabet	Alphabet
building	int[]

Public Methods

Method	Description
BaseChain ( ) : System	Initializes a new instance of the BaseChain class with 0 length.
BaseChain ( List elements ) : System	Initializes a new instance of the BaseChain class from list of elements.
BaseChain ( int length ) : System	Initializes a new instance of the BaseChain class.
BaseChain ( int building, Alphabet alphabet ) : System	Initializes a new instance of the BaseChain class with provided building and alphabet. Only simple validation is made.
BaseChain ( int building, Alphabet alphabet, long id ) : System	Initializes a new instance of the BaseChain class with provided building and alphabet. Only simple validation is made.
BaseChain ( string source ) : System	Initializes a new instance of the BaseChain class from string. Each character becomes element.
ClearAndSetNewLength ( int length ) : void	Deletes chain (building and alphabet) and creates new empty chain with given length.
Clone ( ) : IBaseObject	Creates clone of this chain.
DeleteAt ( int index ) : void	Removes given position.
Equals ( object other ) : bool	The equals.
Get ( int index ) : IBaseObject	Returns element by index.
GetLength ( ) : int	The length of chain.
RemoveAt ( int index ) : void	Removes element from given position.
Set ( IBaseObject item, int index ) : void	Sets or replaces element in specified position.

Protected Methods

Method	Description
FillClone ( BaseChain clone ) : void	Fills the clone of chain with clones of alphabet and building.

Method Details

BaseChain() public method

Initializes a new instance of the BaseChain class with 0 length.

public BaseChain ( ) : System
return	System

BaseChain() public method

Initializes a new instance of the BaseChain class from list of elements.

public BaseChain ( List elements ) : System
elements	List	/// The elements. ///
return	System

BaseChain() public method

Initializes a new instance of the BaseChain class.

public BaseChain ( int length ) : System
length	int	/// The length of chain. ///
return	System

BaseChain() public method

Initializes a new instance of the BaseChain class with provided building and alphabet. Only simple validation is made.

public BaseChain ( int building, Alphabet alphabet ) : System
building	int	/// The building of chain. ///
alphabet	Alphabet	/// The alphabet of chain. ///
return	System

BaseChain() public method

Initializes a new instance of the BaseChain class with provided building and alphabet. Only simple validation is made.

public BaseChain ( int building, Alphabet alphabet, long id ) : System
building	int	/// The building of chain. ///
alphabet	Alphabet	/// The alphabet of chain. ///
id	long	/// Id of sequence ///
return	System

BaseChain() public method

Initializes a new instance of the BaseChain class from string. Each character becomes element.

public BaseChain ( string source ) : System
source	string	/// The source string. ///
return	System

ClearAndSetNewLength() public method

Deletes chain (building and alphabet) and creates new empty chain with given length.

/// Thrown if length of new sequence is less then zero. ///

public ClearAndSetNewLength ( int length ) : void
length	int	/// New chain length. ///
return	void

Clone() public method

Creates clone of this chain.

public Clone ( ) : IBaseObject
return	IBaseObject

DeleteAt() public method

Removes given position.

public DeleteAt ( int index ) : void
index	int	/// Index of deleted position. ///
return	void

Equals() public method

The equals.

public Equals ( object other ) : bool
other	object	/// The other. ///
return	bool

FillClone() protected method

Fills the clone of chain with clones of alphabet and building.

protected FillClone ( BaseChain clone ) : void
clone	BaseChain	/// The clone. ///
return	void

Get() public method

Returns element by index.

public Get ( int index ) : IBaseObject
index	int	/// Index of element. ///
return	IBaseObject

GetLength() public method

The length of chain.

public GetLength ( ) : int
return	int

RemoveAt() public method

Removes element from given position.

public RemoveAt ( int index ) : void
index	int	/// Index of deleted element. ///
return	void

Set() public method

Sets or replaces element in specified position.

public Set ( IBaseObject item, int index ) : void
item	IBaseObject	/// Element to set. ///
index	int	/// Position in sequence. ///
return	void

Property Details

Id public_oe property

Sequence id (from database).

public long Id
return	long

alphabet protected_oe property

The alphabet of chain.

protected Alphabet alphabet
return	Alphabet

building protected_oe property

The building of chain.

protected int[] building
return	int[]