C# Class natix.SimilaritySearch.KnrSeqSearch

Inheritance: BasicIndex

Show file Open project: sadit/natix Class Usage Examples

Public Properties

Property	Type	Description
K	int
MAXCAND	int
R	Index
SEQ	Sequence

Public Methods

Method	Description
Build ( KnrSeqSearch other ) : void
Build ( MetricDB db, Index refs, int K = 7, int maxcand = 1024, SequenceBuilder seq_builder = null ) : void
Build ( MetricDB db, KnrFP knrfp, int maxcand = 1024, SequenceBuilder seq_builder = null ) : void
Build ( MetricDB db, Random rand, int num_refs, int K = 7, int maxcand = 1024, SequenceBuilder seq_builder = null ) : void
BuildApprox ( MetricDB db, Random rand, int num_refs, int K = 7, int maxcand = 1024, SequenceBuilder seq_builder = null ) : void
GetKnr ( object q ) : int[]
GetSortedByPrefix ( SequenceBuilder seq_builder = null, ListIBuilder list_builder = null ) : KnrSeqSearch
GetStoredKnr ( int docid ) : int[]
KnrSeqSearch ( ) : System
KnrSeqSearch ( KnrSeqSearch other ) : System
Load ( BinaryReader Input ) : void
Save ( BinaryWriter Output ) : void
SearchKNN ( int qseq, object q, IResult res, int maxcand ) : IResult
SearchKNN ( object q, int knn, IResult res ) : IResult

Protected Methods

Method	Description
GetCandidates ( int qseq, int maxcand ) : IResult
GetCandidatesPlain ( int qseq, int maxcand ) : IResult

Method Details

Build() public method

public Build ( KnrSeqSearch other ) : void
other	KnrSeqSearch
return	void

Build() public method

public Build ( MetricDB db, Index refs, int K = 7, int maxcand = 1024, SequenceBuilder seq_builder = null ) : void
db	MetricDB
refs	Index
K	int
maxcand	int
seq_builder	SequenceBuilder
return	void

Build() public method

public Build ( MetricDB db, KnrFP knrfp, int maxcand = 1024, SequenceBuilder seq_builder = null ) : void
db	MetricDB
knrfp	KnrFP
maxcand	int
seq_builder	SequenceBuilder
return	void

Build() public method

public Build ( MetricDB db, Random rand, int num_refs, int K = 7, int maxcand = 1024, SequenceBuilder seq_builder = null ) : void
db	MetricDB
rand	System.Random
num_refs	int
K	int
maxcand	int
seq_builder	SequenceBuilder
return	void

BuildApprox() public method

public BuildApprox ( MetricDB db, Random rand, int num_refs, int K = 7, int maxcand = 1024, SequenceBuilder seq_builder = null ) : void
db	MetricDB
rand	System.Random
num_refs	int
K	int
maxcand	int
seq_builder	SequenceBuilder
return	void

GetCandidates() protected method

protected GetCandidates ( int qseq, int maxcand ) : IResult
qseq	int
maxcand	int
return	IResult

GetCandidatesPlain() protected method

protected GetCandidatesPlain ( int qseq, int maxcand ) : IResult
qseq	int
maxcand	int
return	IResult

GetKnr() public method

public GetKnr ( object q ) : int[]
q	object
return	int[]

GetSortedByPrefix() public method

public GetSortedByPrefix ( SequenceBuilder seq_builder = null, ListIBuilder list_builder = null ) : KnrSeqSearch
seq_builder	SequenceBuilder
list_builder	ListIBuilder
return	KnrSeqSearch

GetStoredKnr() public method

public GetStoredKnr ( int docid ) : int[]
docid	int
return	int[]

KnrSeqSearch() public method

public KnrSeqSearch ( ) : System
return	System

KnrSeqSearch() public method

public KnrSeqSearch ( KnrSeqSearch other ) : System
other	KnrSeqSearch
return	System

Load() public method

public Load ( BinaryReader Input ) : void
Input	System.IO.BinaryReader
return	void

Save() public method

public Save ( BinaryWriter Output ) : void
Output	System.IO.BinaryWriter
return	void

SearchKNN() public method

public SearchKNN ( int qseq, object q, IResult res, int maxcand ) : IResult
qseq	int
q	object
res	IResult
maxcand	int
return	IResult

SearchKNN() public method

public SearchKNN ( object q, int knn, IResult res ) : IResult
q	object
knn	int
res	IResult
return	IResult

Property Details

K public property

public int K
return	int

MAXCAND public property

public int MAXCAND
return	int

R public property

public Index R
return	Index

SEQ public property

public Sequence SEQ
return	Sequence