C# Class libsbml.libsbml

Show file Open project: sys-bio/libroadrunner-deps

Public Properties

Property Type Description
cerr OStream
clog OStream
cout OStream

Public Methods

Method Description
BiolQualifierType_fromString ( string s ) : int
BiolQualifierType_toString ( int type ) : string
DowncastASTBase ( IntPtr cPtr, bool owner ) : ASTBase
DowncastExtension ( IntPtr cPtr, bool owner ) : SBMLExtension
DowncastSBMLConverter ( IntPtr cPtr, bool owner ) : SBMLConverter
DowncastSBMLNamespaces ( IntPtr cPtr, bool owner ) : SBMLNamespaces
DowncastSBase ( IntPtr cPtr, bool owner ) : SBase
DowncastSBasePlugin ( IntPtr cPtr, bool owner ) : SBasePlugin
ModelQualifierType_fromString ( string s ) : int
ModelQualifierType_toString ( int type ) : string
OperationReturnValue_toString ( int returnValue ) : string
SBMLTypeCode_toString ( int tc, string pkgName ) : string
SBML_deleteL3Parser ( ) : void
UnitKind_equals ( int uk1, int uk2 ) : int
UnitKind_forName ( string name ) : int
UnitKind_isValidUnitKindString ( string str, long level, long version ) : int
UnitKind_toString ( int uk ) : string
formulaToL3String ( ASTNode tree ) : string
formulaToL3StringWithSettings ( ASTNode tree, L3ParserSettings settings ) : string
formulaToString ( ASTNode tree ) : string
getCoreTypeFromName ( string name ) : int
getDefaultL3ParserSettings ( ) : L3ParserSettings
getLastParseL3Error ( ) : string
getLibSBMLDependencyVersionOf ( string option ) : string
getLibSBMLDottedVersion ( ) : string
getLibSBMLVersion ( ) : int
getLibSBMLVersionString ( ) : string
getNameFromCoreType ( int type ) : string
isCoreTopLevelMathMLFunctionNodeTag ( string name ) : bool
isCoreTopLevelMathMLNumberNodeTag ( string name ) : bool
isLibSBMLCompiledWith ( string option ) : int
parseFormula ( string formula ) : ASTNode
parseL3Formula ( string formula ) : ASTNode
parseL3FormulaWithModel ( string formula, Model model ) : ASTNode
parseL3FormulaWithSettings ( string formula, L3ParserSettings settings ) : ASTNode
readMathMLFromString ( string xml ) : ASTNode
readMathMLFromStringWithNamespaces ( string xml, XMLNamespaces xmlns ) : ASTNode
readSBML ( string filename ) : SBMLDocument
readSBMLFromFile ( string filename ) : SBMLDocument
readSBMLFromString ( string xml ) : SBMLDocument
representsBinaryFunction ( int type ) : bool
representsBinaryFunction ( int type, ASTBasePlugin plugin ) : bool
representsFunction ( int type ) : bool
representsFunction ( int type, ASTBasePlugin plugin ) : bool
representsFunctionRequiringAtLeastTwoArguments ( int type ) : bool
representsNaryFunction ( int type ) : bool
representsNaryFunction ( int type, ASTBasePlugin plugin ) : bool
representsNumber ( int type ) : bool
representsQualifier ( int type ) : bool
representsQualifier ( int type, ASTBasePlugin plugin ) : bool
representsUnaryFunction ( int type ) : bool
representsUnaryFunction ( int type, ASTBasePlugin plugin ) : bool
writeMathMLToString ( ASTNode node ) : string
writeSBML ( SBMLDocument d, string filename ) : int
writeSBMLToFile ( SBMLDocument d, string filename ) : int
writeSBMLToString ( SBMLDocument d ) : string

Method Details

BiolQualifierType_fromString() public static method

public static BiolQualifierType_fromString ( string s ) : int
s string
return int

BiolQualifierType_toString() public static method

public static BiolQualifierType_toString ( int type ) : string
type int
return string

DowncastASTBase() public static method

public static DowncastASTBase ( IntPtr cPtr, bool owner ) : ASTBase
cPtr System.IntPtr
owner bool
return ASTBase

DowncastExtension() public static method

public static DowncastExtension ( IntPtr cPtr, bool owner ) : SBMLExtension
cPtr System.IntPtr
owner bool
return SBMLExtension

DowncastSBMLConverter() public static method

public static DowncastSBMLConverter ( IntPtr cPtr, bool owner ) : SBMLConverter
cPtr System.IntPtr
owner bool
return SBMLConverter

DowncastSBMLNamespaces() public static method

public static DowncastSBMLNamespaces ( IntPtr cPtr, bool owner ) : SBMLNamespaces
cPtr System.IntPtr
owner bool
return SBMLNamespaces

DowncastSBase() public static method

public static DowncastSBase ( IntPtr cPtr, bool owner ) : SBase
cPtr System.IntPtr
owner bool
return SBase

DowncastSBasePlugin() public static method

public static DowncastSBasePlugin ( IntPtr cPtr, bool owner ) : SBasePlugin
cPtr System.IntPtr
owner bool
return SBasePlugin

ModelQualifierType_fromString() public static method

public static ModelQualifierType_fromString ( string s ) : int
s string
return int

ModelQualifierType_toString() public static method

public static ModelQualifierType_toString ( int type ) : string
type int
return string

OperationReturnValue_toString() public static method

public static OperationReturnValue_toString ( int returnValue ) : string
returnValue int
return string

SBMLTypeCode_toString() public static method

public static SBMLTypeCode_toString ( int tc, string pkgName ) : string
tc int
pkgName string
return string

SBML_deleteL3Parser() public static method

public static SBML_deleteL3Parser ( ) : void
return void

UnitKind_equals() public static method

public static UnitKind_equals ( int uk1, int uk2 ) : int
uk1 int
uk2 int
return int

UnitKind_forName() public static method

public static UnitKind_forName ( string name ) : int
name string
return int

UnitKind_isValidUnitKindString() public static method

public static UnitKind_isValidUnitKindString ( string str, long level, long version ) : int
str string
level long
version long
return int

UnitKind_toString() public static method

public static UnitKind_toString ( int uk ) : string
uk int
return string

formulaToL3String() public static method

public static formulaToL3String ( ASTNode tree ) : string
tree ASTNode
return string

formulaToL3StringWithSettings() public static method

public static formulaToL3StringWithSettings ( ASTNode tree, L3ParserSettings settings ) : string
tree ASTNode
settings L3ParserSettings
return string

formulaToString() public static method

public static formulaToString ( ASTNode tree ) : string
tree ASTNode
return string

getCoreTypeFromName() public static method

public static getCoreTypeFromName ( string name ) : int
name string
return int

getDefaultL3ParserSettings() public static method

public static getDefaultL3ParserSettings ( ) : L3ParserSettings
return L3ParserSettings

getLastParseL3Error() public static method

public static getLastParseL3Error ( ) : string
return string

getLibSBMLDependencyVersionOf() public static method

public static getLibSBMLDependencyVersionOf ( string option ) : string
option string
return string

getLibSBMLDottedVersion() public static method

public static getLibSBMLDottedVersion ( ) : string
return string

getLibSBMLVersion() public static method

public static getLibSBMLVersion ( ) : int
return int

getLibSBMLVersionString() public static method

public static getLibSBMLVersionString ( ) : string
return string

getNameFromCoreType() public static method

public static getNameFromCoreType ( int type ) : string
type int
return string

isCoreTopLevelMathMLFunctionNodeTag() public static method

public static isCoreTopLevelMathMLFunctionNodeTag ( string name ) : bool
name string
return bool

isCoreTopLevelMathMLNumberNodeTag() public static method

public static isCoreTopLevelMathMLNumberNodeTag ( string name ) : bool
name string
return bool

isLibSBMLCompiledWith() public static method

public static isLibSBMLCompiledWith ( string option ) : int
option string
return int

parseFormula() public static method

public static parseFormula ( string formula ) : ASTNode
formula string
return ASTNode

parseL3Formula() public static method

public static parseL3Formula ( string formula ) : ASTNode
formula string
return ASTNode

parseL3FormulaWithModel() public static method

public static parseL3FormulaWithModel ( string formula, Model model ) : ASTNode
formula string
model Model
return ASTNode

parseL3FormulaWithSettings() public static method

public static parseL3FormulaWithSettings ( string formula, L3ParserSettings settings ) : ASTNode
formula string
settings L3ParserSettings
return ASTNode

readMathMLFromString() public static method

public static readMathMLFromString ( string xml ) : ASTNode
xml string
return ASTNode

readMathMLFromStringWithNamespaces() public static method

public static readMathMLFromStringWithNamespaces ( string xml, XMLNamespaces xmlns ) : ASTNode
xml string
xmlns XMLNamespaces
return ASTNode

readSBML() public static method

public static readSBML ( string filename ) : SBMLDocument
filename string
return SBMLDocument

readSBMLFromFile() public static method

public static readSBMLFromFile ( string filename ) : SBMLDocument
filename string
return SBMLDocument

readSBMLFromString() public static method

public static readSBMLFromString ( string xml ) : SBMLDocument
xml string
return SBMLDocument

representsBinaryFunction() public static method

public static representsBinaryFunction ( int type ) : bool
type int
return bool

representsBinaryFunction() public static method

public static representsBinaryFunction ( int type, ASTBasePlugin plugin ) : bool
type int
plugin ASTBasePlugin
return bool

representsFunction() public static method

public static representsFunction ( int type ) : bool
type int
return bool

representsFunction() public static method

public static representsFunction ( int type, ASTBasePlugin plugin ) : bool
type int
plugin ASTBasePlugin
return bool

representsFunctionRequiringAtLeastTwoArguments() public static method

public static representsFunctionRequiringAtLeastTwoArguments ( int type ) : bool
type int
return bool

representsNaryFunction() public static method

public static representsNaryFunction ( int type ) : bool
type int
return bool

representsNaryFunction() public static method

public static representsNaryFunction ( int type, ASTBasePlugin plugin ) : bool
type int
plugin ASTBasePlugin
return bool

representsNumber() public static method

public static representsNumber ( int type ) : bool
type int
return bool

representsQualifier() public static method

public static representsQualifier ( int type ) : bool
type int
return bool

representsQualifier() public static method

public static representsQualifier ( int type, ASTBasePlugin plugin ) : bool
type int
plugin ASTBasePlugin
return bool

representsUnaryFunction() public static method

public static representsUnaryFunction ( int type ) : bool
type int
return bool

representsUnaryFunction() public static method

public static representsUnaryFunction ( int type, ASTBasePlugin plugin ) : bool
type int
plugin ASTBasePlugin
return bool

writeMathMLToString() public static method

public static writeMathMLToString ( ASTNode node ) : string
node ASTNode
return string

writeSBML() public static method

public static writeSBML ( SBMLDocument d, string filename ) : int
d SBMLDocument
filename string
return int

writeSBMLToFile() public static method

public static writeSBMLToFile ( SBMLDocument d, string filename ) : int
d SBMLDocument
filename string
return int

writeSBMLToString() public static method

public static writeSBMLToString ( SBMLDocument d ) : string
d SBMLDocument
return string

Property Details

cerr public static property

public static OStream cerr
return OStream

clog public static property

public static OStream clog
return OStream

cout public static property

public static OStream cout
return OStream