C# Class PrimerDesigner.BlastResult

Show file Open project: igemsoftware/BU_Wellesley_Software_2011

Public Methods

Method	Description
BlastResult ( String chromosome, int hitNum, Double bitScore, Double score, Double eValue, int queryStart, int queryStop, int hitStart, int hitStop, int queryFrame, int hitFrame, Double identity, int alignment, String querySeq, String hitSeq, String midlines ) : System
GetBitScore ( ) : Double
GetChromosome ( ) : String
GetEvalue ( ) : Double
GetHitFrame ( ) : int
GetHitSeq ( ) : String
GetHitStart ( ) : int
GetHitStop ( ) : int
GetIdentity ( ) : Double
GetLength ( ) : int
GetMidlines ( ) : String
GetNum ( ) : int
GetQueryFrame ( ) : int
GetQuerySeq ( ) : String
GetQueryStart ( ) : int
GetQueryStop ( ) : int
GetScore ( ) : Double
getOrient ( ) : int
setOrient ( int o ) : void	Setter for orientation Sets the scale (change in width) of the BlastResult for the ScatterViewItem created in the BlastInstance method of SurfaceWindow1.xaml.cs.
toString ( ) : String	ToString method Formats the BlastResult instance as a String.

Method Details

BlastResult() public method

public BlastResult ( String chromosome, int hitNum, Double bitScore, Double score, Double eValue, int queryStart, int queryStop, int hitStart, int hitStop, int queryFrame, int hitFrame, Double identity, int alignment, String querySeq, String hitSeq, String midlines ) : System
chromosome	String
hitNum	int
bitScore	Double
score	Double
eValue	Double
queryStart	int
queryStop	int
hitStart	int
hitStop	int
queryFrame	int
hitFrame	int
identity	Double
alignment	int
querySeq	String
hitSeq	String
midlines	String
return	System

GetBitScore() public method

public GetBitScore ( ) : Double
return	Double

GetChromosome() public method

public GetChromosome ( ) : String
return	String

GetEvalue() public method

public GetEvalue ( ) : Double
return	Double

GetHitFrame() public method

public GetHitFrame ( ) : int
return	int

GetHitSeq() public method

public GetHitSeq ( ) : String
return	String

GetHitStart() public method

public GetHitStart ( ) : int
return	int

GetHitStop() public method

public GetHitStop ( ) : int
return	int

GetIdentity() public method

public GetIdentity ( ) : Double
return	Double

GetLength() public method

public GetLength ( ) : int
return	int

GetMidlines() public method

public GetMidlines ( ) : String
return	String

GetNum() public method

public GetNum ( ) : int
return	int

GetQueryFrame() public method

public GetQueryFrame ( ) : int
return	int

GetQuerySeq() public method

public GetQuerySeq ( ) : String
return	String

GetQueryStart() public method

public GetQueryStart ( ) : int
return	int

GetQueryStop() public method

public GetQueryStop ( ) : int
return	int

GetScore() public method

public GetScore ( ) : Double
return	Double

getOrient() public method

public getOrient ( ) : int
return	int

setOrient() public method

Setter for orientation Sets the scale (change in width) of the BlastResult for the ScatterViewItem created in the BlastInstance method of SurfaceWindow1.xaml.cs.

public setOrient ( int o ) : void
o	int
return	void

toString() public method

ToString method Formats the BlastResult instance as a String.

public toString ( ) : String
return	String