C# Class ImsInformed.Scoring.TargetPresenceLikelihoodFunctions

The likelihood function for if the feature is an actual ion instead of random noise.

Show file Open project: PNNL-Comp-Mass-Spec/IMS-Informed-Library

Public Methods

Method	Description
IntensityDominantLikelihoodFunction ( this observedPeak ) : double	The intensity dominant likelihood function. Say you have a pure sample, roll with this one might give better results.
IntensityIndependentLikelihoodFunction ( this observedPeak ) : double	The intensity independent likelihood function. Better used if you have strong faith in the isotopic score 100% and/or your sample is really mixed and intensity is useless.
NeutralLikelihoodFunction ( this observedPeak ) : double	The neutral likelihood function.

Method Details

IntensityDominantLikelihoodFunction() public static method

The intensity dominant likelihood function. Say you have a pure sample, roll with this one might give better results.

public static IntensityDominantLikelihoodFunction ( this observedPeak ) : double
observedPeak	this	/// The observed Peak. ///
return	double

IntensityIndependentLikelihoodFunction() public static method

The intensity independent likelihood function. Better used if you have strong faith in the isotopic score 100% and/or your sample is really mixed and intensity is useless.

public static IntensityIndependentLikelihoodFunction ( this observedPeak ) : double
observedPeak	this	/// The observed Peak. ///
return	double

NeutralLikelihoodFunction() public static method

The neutral likelihood function.

public static NeutralLikelihoodFunction ( this observedPeak ) : double
observedPeak	this	/// The observed peak. ///
return	double