C# Class CSMSL.IO.OMSSA.OmssaModification

Inheritance: Modification

Show file Open project: dbaileychess/CSMSL Class Usage Examples

Public Properties

Property	Type	Description
GroupedModifications	Modification>.Dictionary

Public Methods

Method	Description
GetAllModifications ( ) : IEnumerable
LoadOmssaModifications ( Stream stream, bool userMod = true ) : void
LoadOmssaModifications ( string file, bool userMod = true ) : void
OmssaModification ( string name, int id, double mono, double average, bool userMod, ModificationSites sites = ModificationSites.None ) : System
ParseModificationLine ( string line ) : int>>.IEnumerable
SplitModificationLine ( string line ) : int>>.IEnumerable
TryGetModification ( int id, OmssaModification &modification ) : bool
TryGetModification ( string name, OmssaModification &modification ) : bool
WriteModificationString ( AminoAcidPolymer polymer ) : string

Private Methods

Method	Description
OmssaModification ( ) : System

Method Details

GetAllModifications() public static method

public static GetAllModifications ( ) : IEnumerable
return	IEnumerable

LoadOmssaModifications() public static method

public static LoadOmssaModifications ( Stream stream, bool userMod = true ) : void
stream	Stream
userMod	bool
return	void

LoadOmssaModifications() public static method

public static LoadOmssaModifications ( string file, bool userMod = true ) : void
file	string
userMod	bool
return	void

OmssaModification() public method

public OmssaModification ( string name, int id, double mono, double average, bool userMod, ModificationSites sites = ModificationSites.None ) : System
name	string
id	int
mono	double
average	double
userMod	bool
sites	ModificationSites
return	System

ParseModificationLine() public static method

public static ParseModificationLine ( string line ) : int>>.IEnumerable
line	string
return	int>>.IEnumerable

SplitModificationLine() public static method

public static SplitModificationLine ( string line ) : int>>.IEnumerable
line	string
return	int>>.IEnumerable

TryGetModification() public static method

public static TryGetModification ( int id, OmssaModification &modification ) : bool
id	int
modification	OmssaModification
return	bool

TryGetModification() public static method

public static TryGetModification ( string name, OmssaModification &modification ) : bool
name	string
modification	OmssaModification
return	bool

WriteModificationString() public static method

public static WriteModificationString ( AminoAcidPolymer polymer ) : string
polymer	AminoAcidPolymer
return	string

Property Details

GroupedModifications public static property

public static Dictionary GroupedModifications
return	Modification>.Dictionary