C# Class CAESGenome.Services.PhredService

Inheritance: IPhredService

Show file Open project: ucdavis/CAESGenome

Public Methods

Method	Description
DownloadResults ( Barcode barcode ) : byte[]
ExecuteValidation ( int barcode ) : void
PhredService ( IRepositoryFactory repositoryFactory ) : System
SaveFiles ( byte contents, string filename, int &fileId ) : string
ScanFiles ( ) : void
SkipValidationAndAllowForDownload ( Barcode barcode ) : void

Private Methods

Method	Description
FindEndIndex ( int numbers, int startIndex ) : int
FindIndexes ( int numbers, int &start, int &end ) : void
FindStartIndex ( int numbers ) : int
ParseFileName ( string filename, int &barcode, char &row, int &col ) : void
ReadPhredFile ( int barcode, BarcodeFile barcodeFile ) : int[]
RunPhred ( int barcode ) : void
ValidatePhred ( BarcodeFile bcf ) : void
WriteFile ( string filename, byte data, string path ) : bool

Method Details

DownloadResults() public method

public DownloadResults ( Barcode barcode ) : byte[]
barcode	Barcode
return	byte[]

ExecuteValidation() public method

public ExecuteValidation ( int barcode ) : void
barcode	int
return	void

PhredService() public method

public PhredService ( IRepositoryFactory repositoryFactory ) : System
repositoryFactory	IRepositoryFactory
return	System

SaveFiles() public method

public SaveFiles ( byte contents, string filename, int &fileId ) : string
contents	byte
filename	string
fileId	int
return	string

ScanFiles() public method

public ScanFiles ( ) : void
return	void

SkipValidationAndAllowForDownload() public method

public SkipValidationAndAllowForDownload ( Barcode barcode ) : void
barcode	Barcode
return	void